RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g08900.1 View Network Show in Genome Browser |
| Other Names | Os12g0191300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 4642210-4647010 Nucleotide Length: 1899 |
| Protein-coding | LOC_Os12g08900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21490 LOC_Os01g61400 LOC_Os05g31080 LOC_Os01g47340 LOC_Os05g49300 LOC_Os04g50864 LOC_Os01g31610 LOC_Os10g08010 |
| Downstream Genes | LOC_Os12g30030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g08900.1 |
| Rice Genome Annotation | LOC_Os12g08900.1 |
| Ricechip | LOC_Os12g08900.1 |
| KEGG | dosa:Os12t0191300-00 |