RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g09250.1 View Network Show in Genome Browser |
| Other Names | Os12g0194600 |
| Description | bZIP transcription factor domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 4848847-4859757 Nucleotide Length: 1110 |
| Protein-coding | LOC_Os12g09250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50760 LOC_Os07g34030 LOC_Os01g07960 LOC_Os07g33670 LOC_Os10g27050 LOC_Os03g18630 |
| Downstream Genes | LOC_Os12g19290 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g09250.1 |
| Rice Genome Annotation | LOC_Os12g09250.1 |
| Ricechip | LOC_Os12g09250.1 |
| KEGG | osa:4351714 dosa:Os12t0194600-01 |
| Entrez-Gene | 4351714 |