RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g09280.2 View Network Show in Genome Browser |
| Other Names | Os12g0194700 |
| Description | RNA polymerase subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 4860236-4863168 Nucleotide Length: 237 |
| Protein-coding | LOC_Os12g09280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18410 LOC_Os10g35290 LOC_Os03g28960 LOC_Os02g49180 LOC_Os01g66580 LOC_Os01g59140 LOC_Os04g41490 LOC_Os07g27930 LOC_Os07g29420 LOC_Os03g38960 LOC_Os08g28980 More.. |
| Downstream Genes | LOC_Os12g36950 LOC_Os12g42150 LOC_Os12g29660 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g09280.2 |
| Rice Genome Annotation | LOC_Os12g09280.2 |
| Ricechip | LOC_Os12g09280.2 |
| KEGG | osa:4351715 dosa:Os12t0194700-01 |
| Entrez-Gene | 4351715 |