RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g10670.1 View Network Show in Genome Browser |
| Other Names | Os12g0209300 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 5703052-5708208 Nucleotide Length: 3525 |
| Protein-coding | LOC_Os12g10670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08380 LOC_Os06g29430 LOC_Os09g04210 LOC_Os08g41250 LOC_Os03g20570 LOC_Os07g14150 LOC_Os03g61810 LOC_Os02g40010 LOC_Os07g30150 LOC_Os04g42520 LOC_Os11g39670 More.. |
| Downstream Genes | LOC_Os12g39860 LOC_Os12g40130 LOC_Os12g13380 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g10670.1 |
| Rice Genome Annotation | LOC_Os12g10670.1 |
| Ricechip | LOC_Os12g10670.1 |
| KEGG | osa:4351770 dosa:Os12t0209300-00 |
| Entrez-Gene | 4351770 |