RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g10740.1 View Network Show in Genome Browser |
| Other Names | Os12g0210400 |
| Description | leucine-rich repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 5765954-5773383 Nucleotide Length: 2904 |
| Protein-coding | LOC_Os12g10740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g32380 LOC_Os02g05630 LOC_Os04g37904 LOC_Os06g48300 LOC_Os02g55560 LOC_Os06g33549 LOC_Os04g56450 LOC_Os02g15594 LOC_Os10g39540 LOC_Os04g52000 LOC_Os06g44210 More.. |
| Downstream Genes | LOC_Os12g39120 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR159a.1 osa-miR159b osa-miR159f |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g10740.1 |
| Rice Genome Annotation | LOC_Os12g10740.1 |
| Ricechip | LOC_Os12g10740.1 |
| KEGG | osa:4351777 dosa:Os12t0210400-01 |
| Entrez-Gene | 4351777 |