RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g10784.1 View Network Show in Genome Browser |
| Other Names | Os12g0210800 |
| Description | 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 5801422-5807238 Nucleotide Length: 876 |
| Protein-coding | LOC_Os12g10784 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49520 LOC_Os01g43020 LOC_Os01g46570 LOC_Os05g49770 LOC_Os03g15950 LOC_Os05g49460 LOC_Os09g20820 LOC_Os06g04510 LOC_Os03g14450 LOC_Os10g08550 LOC_Os08g04790 More.. |
| Downstream Genes | LOC_Os12g36950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g10784.1 |
| Rice Genome Annotation | LOC_Os12g10784.1 |
| Ricechip | LOC_Os12g10784.1 |
| KEGG | osa:4351779 dosa:Os12t0210800-01 |
| Entrez-Gene | 4351779 |