RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g10850.1 View Network Show in Genome Browser |
| Other Names | Os12g0211400 |
| Description | hhH-GPD superfamily base excision DNA repair protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 5849759-5852388 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os12g10850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56130 LOC_Os02g34750 LOC_Os01g58680 LOC_Os05g50290 LOC_Os06g13070 LOC_Os01g11900 LOC_Os11g16580 LOC_Os04g42290 LOC_Os03g10220 LOC_Os02g53680 LOC_Os09g24220 More.. |
| Downstream Genes | LOC_Os12g31370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g10850.1 |
| Rice Genome Annotation | LOC_Os12g10850.1 |
| Ricechip | LOC_Os12g10850.1 |
| KEGG | osa:4351781 dosa:Os12t0211400-00 |
| Entrez-Gene | 4351781 |