RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g11500.1 View Network Show in Genome Browser |
| Other Names | Os12g0217400 |
| Description | resistance protein SlVe1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 6224244-6227225 Nucleotide Length: 2982 |
| Protein-coding | LOC_Os12g11500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g02970 LOC_Os04g12580 LOC_Os05g47770 LOC_Os02g49800 LOC_Os03g17780 LOC_Os04g12560 LOC_Os03g29850 LOC_Os03g58580 LOC_Os12g04220 LOC_Os01g71400 LOC_Os11g04460 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5791 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g11500.1 |
| Rice Genome Annotation | LOC_Os12g11500.1 |
| Ricechip | LOC_Os12g11500.1 |
| KEGG | dosa:Os12t0217400-00 |