RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g11680.1 View Network Show in Genome Browser |
| Other Names | Os12g0218500 |
| Description | verticillium wilt disease resistance protein precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 6340808-6344089 Nucleotide Length: 3120 |
| Protein-coding | LOC_Os12g11680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g02970 LOC_Os03g11360 LOC_Os10g42190 LOC_Os10g31790 LOC_Os04g12580 LOC_Os04g40080 LOC_Os05g47770 LOC_Os02g49800 LOC_Os11g46200 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395u |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g11680.1 |
| Rice Genome Annotation | LOC_Os12g11680.1 |
| Ricechip | LOC_Os12g11680.1 |
| KEGG | osa:9268724 dosa:Os12t0218500-01 |
| Entrez-Gene | 9268724 |