RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g14070.1 View Network Show in Genome Browser |
| Other Names | Os12g0244100 |
| Description | DnaK family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 7986161-7991953 Nucleotide Length: 2097 |
| Protein-coding | LOC_Os12g14070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43930 LOC_Os12g07060 LOC_Os06g02620 LOC_Os08g36140 LOC_Os05g06440 LOC_Os04g46390 LOC_Os05g26926 LOC_Os05g26902 LOC_Os02g03600 LOC_Os02g35000 LOC_Os10g42439 More.. |
| Downstream Genes | LOC_Os12g42440 LOC_Os12g41820 LOC_Os12g15590 LOC_Os12g31840 LOC_Os12g17070 LOC_Os12g27070 LOC_Os12g31460 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g14070.1 |
| Rice Genome Annotation | LOC_Os12g14070.1 |
| Ricechip | LOC_Os12g14070.1 |
| KEGG | osa:4351875 dosa:Os12t0244100-01 |
| Entrez-Gene | 4351875 |