RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g15470.1 View Network Show in Genome Browser |
| Other Names | Os12g0257000 |
| Description | OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 8829523-8834630 Nucleotide Length: 1566 |
| Protein-coding | LOC_Os12g15470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13560 LOC_Os07g05720 LOC_Os04g51330 LOC_Os07g41600 LOC_Os12g02120 LOC_Os09g29404 LOC_Os11g02180 LOC_Os03g31490 LOC_Os03g22770 LOC_Os01g63270 LOC_Os08g29780 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529b |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g15470.1 |
| Rice Genome Annotation | LOC_Os12g15470.1 |
| Ricechip | LOC_Os12g15470.1 |
| KEGG | osa:4351908 dosa:Os12t0257000-01 |
| Entrez-Gene | 4351908 |