RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g16290.1 View Network Show in Genome Browser |
| Other Names | Os12g0263800 |
| Description | isoflavone reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 9315228-9318123 Nucleotide Length: 375 |
| Protein-coding | LOC_Os12g16290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g16280 LOC_Os12g16260 LOC_Os12g16250 LOC_Os12g16240 LOC_Os01g27140 LOC_Os09g36200 LOC_Os01g04350 LOC_Os07g05570 LOC_Os06g21820 LOC_Os01g58114 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e osa-miR1858a osa-miR1858b osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g16290.1 |
| Rice Genome Annotation | LOC_Os12g16290.1 |
| Ricechip | LOC_Os12g16290.1 |
| KEGG | osa:9269561 dosa:Os12t0263800-02 |
| Entrez-Gene | 9269561 |