RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g16350.13 View Network Show in Genome Browser |
| Other Names | Os12g0264500 |
| Description | enoyl-CoA hydratase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 9350855-9365584 Nucleotide Length: 894 |
| Protein-coding | LOC_Os12g16350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g46372 LOC_Os08g40610 LOC_Os08g27090 LOC_Os07g20150 LOC_Os03g55930 LOC_Os02g24612 LOC_Os09g32274 LOC_Os12g10580 LOC_Os07g09060 LOC_Os08g45040 LOC_Os07g10250 More.. |
| Downstream Genes | LOC_Os12g34550 LOC_Os12g42876 LOC_Os12g42884 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e osa-miR1436 osa-miR812g osa-miR812h osa-miR812i osa-miR812j osa-miR1862f osa-miR1862g osa-miR5799 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g16350.13 |
| Rice Genome Annotation | LOC_Os12g16350.13 |
| Ricechip | LOC_Os12g16350.13 |
| KEGG | osa:4351929 dosa:Os12t0264500-02 |
| Entrez-Gene | 4351929 |