RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g19470.1 View Network Show in Genome Browser |
| Other Names | Os12g0292400 |
| Description | ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 11320267-11322547 Nucleotide Length: 510 |
| Protein-coding | LOC_Os12g19470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g35330 LOC_Os11g32770 LOC_Os01g58020 LOC_Os12g10580 LOC_Os05g48630 LOC_Os04g33830 LOC_Os04g38600 LOC_Os07g37240 LOC_Os11g47970 LOC_Os01g31690 LOC_Os12g19381 More.. |
| Downstream Genes | LOC_Os12g38640 LOC_Os12g23180 |
| Reference | |
|---|---|
| PubMed | 22811433 21951138 17379698 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g19470.1 |
| Rice Genome Annotation | LOC_Os12g19470.1 |
| Ricechip | LOC_Os12g19470.1 |
| KEGG | osa:4352021 dosa:Os12t0292400-01 |
| Entrez-Gene | 4352021 |