RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g19530.1 View Network Show in Genome Browser |
| Other Names | Os12g0292900 |
| Description | ATP-binding region, ATPase-like domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 11349808-11357236 Nucleotide Length: 1329 |
| Protein-coding | LOC_Os12g19530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49380 LOC_Os10g10190 LOC_Os03g58910 LOC_Os02g27000 LOC_Os09g39560 LOC_Os09g10770 LOC_Os11g31480 LOC_Os07g44330 LOC_Os08g29780 LOC_Os02g13970 LOC_Os12g02350 More.. |
| Downstream Genes | LOC_Os12g37690 LOC_Os12g44370 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b osa-miR531a osa-miR531c |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g19530.1 |
| Rice Genome Annotation | LOC_Os12g19530.1 |
| Ricechip | LOC_Os12g19530.1 |
| KEGG | osa:9272053 dosa:Os12t0292900-02 |
| Entrez-Gene | 9272053 |