RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g19549.1 View Network Show in Genome Browser |
| Other Names | Os12g0293100 |
| Description | telomerase reverse transcriptase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 11362596-11378756 Nucleotide Length: 3780 |
| Protein-coding | LOC_Os12g19549 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g08729 LOC_Os09g30412 LOC_Os09g30418 LOC_Os03g58640 LOC_Os03g63920 LOC_Os03g26460 LOC_Os04g52960 LOC_Os08g39140 LOC_Os11g48090 LOC_Os02g42040 LOC_Os03g21620 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 rn00230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g19549.1 |
| Rice Genome Annotation | LOC_Os12g19549.1 |
| Ricechip | LOC_Os12g19549.1 |
| KEGG | osa:4352024 dosa:Os12t0293100-01 |
| Entrez-Gene | 4352024 |