RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g21500.1 View Network Show in Genome Browser |
| Other Names | Os12g0403800 |
| Description | exosome complex exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 12075112-12087744 Nucleotide Length: 855 |
| Protein-coding | LOC_Os12g21500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g55940 LOC_Os06g07896 LOC_Os03g62720 LOC_Os08g02360 LOC_Os03g63720 LOC_Os09g07820 LOC_Os07g07310 LOC_Os09g34010 LOC_Os05g49970 LOC_Os05g01750 LOC_Os07g44190 More.. |
| Downstream Genes | LOC_Os12g31880 LOC_Os12g34550 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g21500.1 |
| Rice Genome Annotation | LOC_Os12g21500.1 |
| Ricechip | LOC_Os12g21500.1 |
| KEGG | osa:4352037 dosa:Os12t0403800-02 |
| Entrez-Gene | 4352037 |