RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g23180.1 View Network Show in Genome Browser |
| Other Names | Os12g0420200 |
| Description | 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 13103626-13106311 Nucleotide Length: 1131 |
| Protein-coding | LOC_Os12g23180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48630 LOC_Os02g34810 LOC_Os08g35760 LOC_Os07g01760 LOC_Os07g11110 LOC_Os03g16050 LOC_Os02g01340 LOC_Os03g52840 LOC_Os02g49680 LOC_Os08g29170 LOC_Os07g46750 More.. |
| Downstream Genes | LOC_Os12g23200 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g23180.1 |
| Rice Genome Annotation | LOC_Os12g23180.1 |
| Ricechip | LOC_Os12g23180.1 |
| KEGG | osa:4352083 dosa:Os12t0420200-01 |
| Entrez-Gene | 4352083 |