RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g23190.1 View Network Show in Genome Browser |
| Other Names | Os12g0420300 |
| Description | tyrosine phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 13111080-13114159 Nucleotide Length: 615 |
| Protein-coding | LOC_Os12g23190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17740 LOC_Os12g21890 LOC_Os06g05870 LOC_Os01g20940 LOC_Os12g09120 LOC_Os03g43360 LOC_Os08g34120 LOC_Os06g46950 LOC_Os01g57470 LOC_Os09g24970 LOC_Os03g46390 More.. |
| Downstream Genes | LOC_Os12g43550 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g23190.1 |
| Rice Genome Annotation | LOC_Os12g23190.1 |
| Ricechip | LOC_Os12g23190.1 |
| KEGG | osa:9270659 dosa:Os12t0420300-01 |
| Entrez-Gene | 9270659 |