RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g25120.1 View Network Show in Genome Browser |
| Other Names | Os12g0438000 |
| Description | core histone H2A/H2B/H3/H4, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 14423595-14424893 Nucleotide Length: 408 |
| Protein-coding | LOC_Os12g25120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38740 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os01g62230 More.. |
| Downstream Genes | LOC_Os12g34510 LOC_Os12g39070 LOC_Os12g26030 LOC_Os12g33100 LOC_Os12g43100 LOC_Os12g42370 LOC_Os12g41400 LOC_Os12g44150 LOC_Os12g35030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g25120.1 |
| Rice Genome Annotation | LOC_Os12g25120.1 |
| Ricechip | LOC_Os12g25120.1 |
| KEGG | osa:4352128 dosa:Os12t0438000-02 |
| Entrez-Gene | 4352128 |