RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g25690.1 View Network Show in Genome Browser |
| Other Names | Os12g0443500 |
| Description | UDP-glucose 6-dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 14887908-14890480 Nucleotide Length: 1443 |
| Protein-coding | LOC_Os12g25690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32110 LOC_Os07g14850 LOC_Os08g35710 LOC_Os05g03174 LOC_Os01g16030 LOC_Os02g40030 LOC_Os04g59330 LOC_Os01g09010 LOC_Os03g12250 LOC_Os05g06720 LOC_Os06g03640 More.. |
| Downstream Genes | LOC_Os12g25700 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn00053 rn00500 rn00520 rn01100 rn01110 |
| Metacyc Pathways | PWY-3821 PWY-4821 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g25690.1 |
| Rice Genome Annotation | LOC_Os12g25690.1 |
| Ricechip | LOC_Os12g25690.1 |
| KEGG | osa:4352146 dosa:Os12t0443500-01 |
| Entrez-Gene | 4352146 |