RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g27090.1 View Network Show in Genome Browser |
| Other Names | Os12g0456400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 15857979-15866742 Nucleotide Length: 3093 |
| Protein-coding | LOC_Os12g27090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16110 LOC_Os01g74030 LOC_Os07g10350 LOC_Os05g01910 LOC_Os12g07300 LOC_Os07g49270 LOC_Os06g43690 LOC_Os04g52960 LOC_Os09g02810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g27090.1 |
| Rice Genome Annotation | LOC_Os12g27090.1 |
| Ricechip | LOC_Os12g27090.1 |
| KEGG | osa:4352173 dosa:Os12t0456400-01 |
| Entrez-Gene | 4352173 |