RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g28177.1 View Network Show in Genome Browser |
| Other Names | Os12g0468000 |
| Description | ATPase 3, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 16640803-16642694 Nucleotide Length: 1533 |
| Protein-coding | LOC_Os12g28177 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os07g08170 LOC_Os12g28137 LOC_Os03g05730 LOC_Os01g62040 LOC_Os10g30580 LOC_Os02g21970 LOC_Os12g07720 LOC_Os03g31300 LOC_Os08g45010 LOC_Os07g49150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g28177.1 |
| Rice Genome Annotation | LOC_Os12g28177.1 |
| Ricechip | LOC_Os12g28177.1 |
| KEGG | dosa:Os12t0468000-01 |