RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g29950.1 View Network Show in Genome Browser |
| Other Names | Os12g0484600 |
| Description | nodulin, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 17900930-17903046 Nucleotide Length: 1800 |
| Protein-coding | LOC_Os12g29950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74200 LOC_Os05g47770 LOC_Os10g02970 LOC_Os01g71400 LOC_Os03g15770 LOC_Os06g05520 LOC_Os03g61740 LOC_Os10g27340 LOC_Os09g22450 LOC_Os06g43700 LOC_Os06g18000 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g29950.1 |
| Rice Genome Annotation | LOC_Os12g29950.1 |
| Ricechip | LOC_Os12g29950.1 |
| KEGG | osa:4352225 dosa:Os12t0484600-02 |
| Entrez-Gene | 4352225 |