RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g30020.2 View Network Show in Genome Browser |
| Other Names | Os12g0485400 |
| Description | cyclin-T1-4, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 17955781-17964343 Nucleotide Length: 1632 |
| Protein-coding | LOC_Os12g30020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g41100 LOC_Os06g51110 LOC_Os05g41390 LOC_Os03g52750 LOC_Os03g22570 LOC_Os07g43060 LOC_Os09g29100 LOC_Os08g37390 LOC_Os08g32540 LOC_Os03g12414 LOC_Os04g46660 More.. |
| Downstream Genes | LOC_Os12g31810 LOC_Os12g39830 LOC_Os12g37370 LOC_Os12g39210 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g30020.2 |
| Rice Genome Annotation | LOC_Os12g30020.2 |
| Ricechip | LOC_Os12g30020.2 |
| KEGG | osa:4352229 dosa:Os12t0485400-01 |
| Entrez-Gene | 4352229 |