RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g30040.1 View Network Show in Genome Browser |
| Other Names | Os12g0485600 |
| Description | transmembrane amino acid transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 17979097-17983355 Nucleotide Length: 1527 |
| Protein-coding | LOC_Os12g30040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g19240 LOC_Os06g43700 LOC_Os04g47780 LOC_Os04g38680 LOC_Os03g14080 LOC_Os02g54730 LOC_Os02g49510 LOC_Os01g63770 LOC_Os06g10230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g30040.1 |
| Rice Genome Annotation | LOC_Os12g30040.1 |
| Ricechip | LOC_Os12g30040.1 |
| KEGG | osa:4352231 dosa:Os12t0485600-01 |
| Entrez-Gene | 4352231 |