RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g30060.1 View Network Show in Genome Browser |
| Other Names | Os12g0485800 |
| Description | prefoldin subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 18002159-18005088 Nucleotide Length: 444 |
| Protein-coding | LOC_Os12g30060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g43020 LOC_Os02g14860 LOC_Os02g26440 LOC_Os10g34670 LOC_Os01g68940 LOC_Os05g06450 LOC_Os07g48700 LOC_Os07g26974 LOC_Os05g15140 LOC_Os04g52460 LOC_Os04g37960 More.. |
| Downstream Genes | LOC_Os12g37590 LOC_Os12g41220 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1438 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g30060.1 |
| Rice Genome Annotation | LOC_Os12g30060.1 |
| Ricechip | LOC_Os12g30060.1 |
| KEGG | osa:4352232 dosa:Os12t0485800-01 |
| Entrez-Gene | 4352232 |