RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os12g30540.1 View Network Show in Genome Browser
Other Names	Os12g0489200,Os12g0489100
Description	ubiquitin carboxyl-terminal hydrolase, putative, expressed
Gene Attributes	Chromosome: Chr12 CDS Coordinates (5'-3'): 18334665-18349360 Nucleotide Length: 3378
Protein-coding	LOC_Os12g30540

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g08200 LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os12g08070 LOC_Os06g19680 LOC_Os09g39500 LOC_Os03g13170 LOC_Os04g59560 LOC_Os04g14110 LOC_Os07g32800 More..
Downstream Genes	LOC_Os12g43740

Database Links
Gramene	LOC_Os12g30540.1
Rice Genome Annotation	LOC_Os12g30540.1
Ricechip	LOC_Os12g30540.1
KEGG	osa:4352242 dosa:Os12t0489200-01 dosa:Os12t0489100-01