RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g31350.1 View Network Show in Genome Browser |
| Other Names | Os12g0496900 |
| Description | SSXT protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 18855637-18860647 Nucleotide Length: 558 |
| Protein-coding | LOC_Os12g31350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g01640 LOC_Os08g40830 LOC_Os08g33488 LOC_Os07g01820 LOC_Os03g54160 LOC_Os10g31900 LOC_Os02g36924 LOC_Os02g49840 LOC_Os02g34570 LOC_Os09g12800 LOC_Os07g19560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g31350.1 |
| Rice Genome Annotation | LOC_Os12g31350.1 |
| Ricechip | LOC_Os12g31350.1 |
| KEGG | osa:4352256 dosa:Os12t0496900-01 |
| Entrez-Gene | 4352256 |