RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g31460.1 View Network Show in Genome Browser |
| Other Names | Os12g0498500 |
| Description | heat shock protein DnaJ, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 18918230-18920690 Nucleotide Length: 708 |
| Protein-coding | LOC_Os12g31460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g35180 LOC_Os02g39870 LOC_Os12g14070 LOC_Os03g11910 LOC_Os11g47760 LOC_Os08g25090 LOC_Os05g23740 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2871a-3p osa-miR2871b |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g31460.1 |
| Rice Genome Annotation | LOC_Os12g31460.1 |
| Ricechip | LOC_Os12g31460.1 |
| KEGG | osa:4352264 dosa:Os12t0498500-01 |
| Entrez-Gene | 4352264 |