RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g31480.1 View Network Show in Genome Browser |
| Other Names | Os12g0498700 |
| Description | GPI mannosyltransferase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 18932890-18936126 Nucleotide Length: 1461 |
| Protein-coding | LOC_Os12g31480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39710 LOC_Os01g38670 LOC_Os02g37050 LOC_Os01g38680 LOC_Os04g42490 LOC_Os08g08070 LOC_Os07g37320 LOC_Os07g01560 LOC_Os09g12590 LOC_Os02g06540 LOC_Os03g11900 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g31480.1 |
| Rice Genome Annotation | LOC_Os12g31480.1 |
| Ricechip | LOC_Os12g31480.1 |
| KEGG | osa:4352265 dosa:Os12t0498700-01 |
| Entrez-Gene | 4352265 |