RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g31640.2 View Network Show in Genome Browser |
| Other Names | Os12g0500700 |
| Description | vacuolar protein sorting-associated protein 26, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 19055878-19060976 Nucleotide Length: 810 |
| Protein-coding | LOC_Os12g31640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16550 LOC_Os03g58700 LOC_Os02g39890 LOC_Os01g04260 LOC_Os11g20554 LOC_Os07g31370 LOC_Os03g09140 LOC_Os01g56670 LOC_Os07g43316 LOC_Os02g50780 LOC_Os03g49730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g31640.2 |
| Rice Genome Annotation | LOC_Os12g31640.2 |
| Ricechip | LOC_Os12g31640.2 |
| KEGG | osa:4352271 dosa:Os12t0500700-01 |
| Entrez-Gene | 4352271 |