RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g31800.1 View Network Show in Genome Browser |
| Other Names | Os12g0502200 |
| Description | glycine-rich RNA-binding protein 7, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 19129924-19133778 Nucleotide Length: 777 |
| Protein-coding | LOC_Os12g31800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g19560 LOC_Os08g09350 LOC_Os01g68790 LOC_Os09g02700 LOC_Os07g10250 LOC_Os12g29660 LOC_Os05g51500 LOC_Os10g17454 LOC_Os11g41890 LOC_Os04g41300 LOC_Os03g59050 More.. |
| Downstream Genes | LOC_Os12g38430 LOC_Os12g32240 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g31800.1 |
| Rice Genome Annotation | LOC_Os12g31800.1 |
| Ricechip | LOC_Os12g31800.1 |
| KEGG | osa:4352279 dosa:Os12t0502200-01 |
| Entrez-Gene | 4352279 |