RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g32380.1 View Network Show in Genome Browser |
| Other Names | Os12g0508300 |
| Description | 40S ribosomal protein S29, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 19536726-19541133 Nucleotide Length: 312 |
| Protein-coding | LOC_Os12g32380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21940 LOC_Os01g19840 LOC_Os03g04590 LOC_Os10g32920 LOC_Os05g28750 LOC_Os02g56960 LOC_Os03g38260 LOC_Os07g10720 LOC_Os02g27760 LOC_Os02g14059 LOC_Os06g35730 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os12g41400 LOC_Os12g38310 LOC_Os12g42180 LOC_Os12g42260 LOC_Os12g33240 LOC_Os12g43300 LOC_Os12g43100 LOC_Os12g42370 LOC_Os12g39860 LOC_Os12g39070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g32380.1 |
| Rice Genome Annotation | LOC_Os12g32380.1 |
| Ricechip | LOC_Os12g32380.1 |
| KEGG | osa:4352308 dosa:Os12t0508300-01 |
| Entrez-Gene | 4352308 |