RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g32980.1 View Network Show in Genome Browser |
| Other Names | Os12g0514400 |
| Description | potyvirus VPg interacting protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 19914307-19917975 Nucleotide Length: 1860 |
| Protein-coding | LOC_Os12g32980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g44410 LOC_Os03g19990 LOC_Os03g62370 LOC_Os01g36930 LOC_Os09g31970 LOC_Os08g40180 LOC_Os01g05790 LOC_Os03g28980 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g32980.1 |
| Rice Genome Annotation | LOC_Os12g32980.1 |
| Ricechip | LOC_Os12g32980.1 |
| KEGG | osa:4352338 dosa:Os12t0514400-01 |
| Entrez-Gene | 4352338 |