RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g33080.1 View Network Show in Genome Browser |
| Other Names | Os12g0515400 |
| Description | 2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 20005372-20008889 Nucleotide Length: 1647 |
| Protein-coding | LOC_Os12g33080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g31130 LOC_Os01g46070 LOC_Os08g03640 LOC_Os07g08330 LOC_Os11g04070 LOC_Os12g03880 LOC_Os10g41410 LOC_Os01g49290 LOC_Os04g40950 LOC_Os02g32030 LOC_Os08g33720 More.. |
| Downstream Genes | LOC_Os12g35580 LOC_Os12g38000 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR417 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g33080.1 |
| Rice Genome Annotation | LOC_Os12g33080.1 |
| Ricechip | LOC_Os12g33080.1 |
| KEGG | osa:4352342 dosa:Os12t0515400-01 |
| Entrez-Gene | 4352342 |