RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g33240.1 View Network Show in Genome Browser |
| Other Names | Os12g0517200 |
| Description | mitochondrial ribosomal protein S10, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 20105721-20108020 Nucleotide Length: 339 |
| Protein-coding | LOC_Os12g33240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g37510 LOC_Os12g30490 LOC_Os03g60400 LOC_Os01g14830 LOC_Os03g15870 LOC_Os12g07010 LOC_Os11g06750 LOC_Os07g23244 LOC_Os01g61814 LOC_Os02g04460 LOC_Os03g63410 More.. |
| Downstream Genes | LOC_Os12g42180 LOC_Os12g38000 LOC_Os12g41400 LOC_Os12g43370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g33240.1 |
| Rice Genome Annotation | LOC_Os12g33240.1 |
| Ricechip | LOC_Os12g33240.1 |
| KEGG | osa:4352353 dosa:Os12t0517200-01 |
| Entrez-Gene | 4352353 |