RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g33610.1 View Network Show in Genome Browser |
| Other Names | Os12g0520200 |
| Description | phenylalanine ammonia-lyase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 20292893-20295410 Nucleotide Length: 2043 |
| Protein-coding | LOC_Os12g33610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g24550 LOC_Os06g06090 LOC_Os02g19970 LOC_Os04g36740 LOC_Os07g49520 LOC_Os01g46980 LOC_Os02g45344 LOC_Os03g16920 LOC_Os11g09280 LOC_Os02g01010 LOC_Os06g08770 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00360 rn00940 rn01100 rn01110 rn00910 |
| Metacyc Pathways | PWY1F-467 PWY-1121 PWY-981 PWY-6444 PWY-5883 PWY-6457 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g33610.1 |
| Rice Genome Annotation | LOC_Os12g33610.1 |
| Ricechip | LOC_Os12g33610.1 |
| KEGG | osa:4352358 dosa:Os12t0520200-01 |
| Entrez-Gene | 4352358 |