RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g34524.1 View Network Show in Genome Browser |
| Other Names | Os12g0530100 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 20889965-20899619 Nucleotide Length: 1044 |
| Protein-coding | LOC_Os12g34524 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25330 LOC_Os03g12030 LOC_Os11g02350 LOC_Os04g40730 LOC_Os04g32030 LOC_Os10g02040 LOC_Os05g03450 LOC_Os01g25560 LOC_Os04g42620 LOC_Os07g01370 LOC_Os10g06000 More.. |
| Downstream Genes | LOC_Os12g38360 LOC_Os12g37650 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g34524.1 |
| Rice Genome Annotation | LOC_Os12g34524.1 |
| Ricechip | LOC_Os12g34524.1 |
| KEGG | osa:4352399 dosa:Os12t0530100-01 |
| Entrez-Gene | 4352399 |