RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g34840.1 View Network Show in Genome Browser |
| Other Names | Os12g0533400 |
| Description | rhoGAP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 21206935-21210286 Nucleotide Length: 1353 |
| Protein-coding | LOC_Os12g34840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g24180 LOC_Os01g68890 LOC_Os07g30300 LOC_Os01g49200 LOC_Os11g28310 LOC_Os02g56580 LOC_Os07g46450 LOC_Os04g47580 LOC_Os11g37100 LOC_Os07g32390 LOC_Os06g51110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g34840.1 |
| Rice Genome Annotation | LOC_Os12g34840.1 |
| Ricechip | LOC_Os12g34840.1 |
| KEGG | osa:4352405 dosa:Os12t0533400-00 |
| Entrez-Gene | 4352405 |