RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g34874.1 View Network Show in Genome Browser |
| Other Names | Os12g0534000 |
| Description | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 21230079-21235123 Nucleotide Length: 1596 |
| Protein-coding | LOC_Os12g34874 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g35840 LOC_Os07g34640 LOC_Os03g59620 LOC_Os05g38570 LOC_Os11g14950 LOC_Os06g04280 LOC_Os04g53200 LOC_Os02g16630 LOC_Os02g36340 LOC_Os07g22700 LOC_Os03g15780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g34874.1 |
| Rice Genome Annotation | LOC_Os12g34874.1 |
| Ricechip | LOC_Os12g34874.1 |
| KEGG | osa:4352411 dosa:Os12t0534000-01 |
| Entrez-Gene | 4352411 |