RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g35030.1 View Network Show in Genome Browser |
| Other Names | Os12g0535900 |
| Description | plus-3 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 21322246-21324440 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os12g35030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g06070 LOC_Os07g29360 LOC_Os07g01880 LOC_Os04g25550 LOC_Os05g08970 LOC_Os01g08970 LOC_Os09g36090 LOC_Os02g53230 LOC_Os07g02350 LOC_Os01g56780 LOC_Os03g54930 More.. |
| Downstream Genes | LOC_Os12g38970 LOC_Os12g43100 LOC_Os12g39070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g35030.1 |
| Rice Genome Annotation | LOC_Os12g35030.1 |
| Ricechip | LOC_Os12g35030.1 |
| KEGG | osa:4352419 dosa:Os12t0535900-01 |
| Entrez-Gene | 4352419 |