RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g35630.1 View Network Show in Genome Browser |
| Other Names | Os12g0541500 |
| Description | elongation factor TS family protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 21660651-21664125 Nucleotide Length: 3372 |
| Protein-coding | LOC_Os12g35630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24612 LOC_Os07g38300 LOC_Os01g73450 LOC_Os04g33300 LOC_Os03g08440 LOC_Os07g42450 LOC_Os04g41300 LOC_Os01g63830 LOC_Os03g38230 LOC_Os07g41680 LOC_Os06g07120 More.. |
| Downstream Genes | LOC_Os12g37610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR319a-3p.2-3p osa-miR319b |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g35630.1 |
| Rice Genome Annotation | LOC_Os12g35630.1 |
| Ricechip | LOC_Os12g35630.1 |
| KEGG | osa:4352441 dosa:Os12t0541500-02 |
| Entrez-Gene | 4352441 |