RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g37690.1 View Network Show in Genome Browser |
| Other Names | Os12g0564100 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23135056-23137352 Nucleotide Length: 903 |
| Protein-coding | LOC_Os12g37690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42410 LOC_Os03g25600 LOC_Os02g09359 LOC_Os07g11739 LOC_Os05g02260 LOC_Os05g44590 LOC_Os11g42550 LOC_Os03g29930 LOC_Os12g12360 LOC_Os01g16330 LOC_Os02g10730 More.. |
| Downstream Genes | LOC_Os12g38920 LOC_Os12g39200 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 osa-miR1425-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g37690.1 |
| Rice Genome Annotation | LOC_Os12g37690.1 |
| Ricechip | LOC_Os12g37690.1 |
| KEGG | osa:4352537 dosa:Os12t0564100-01 |
| Entrez-Gene | 4352537 |