RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g37710.1 View Network Show in Genome Browser |
| Other Names | Os12g0564701,Os12g0564400 |
| Description | PsbP, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23148278-23157669 Nucleotide Length: 750 |
| Protein-coding | LOC_Os12g37710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43070 LOC_Os07g04840 LOC_Os11g34940 LOC_Os02g07230 LOC_Os03g39830 LOC_Os03g15033 LOC_Os05g01970 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g37710.1 |
| Rice Genome Annotation | LOC_Os12g37710.1 |
| Ricechip | LOC_Os12g37710.1 |
| KEGG | osa:4352538 dosa:Os12t0564701-00dosa:Os12t0564400-01 |