RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g37720.1 View Network Show in Genome Browser |
| Other Names | Os12g0564600 |
| Description | zinc knuckle family protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23156684-23164663 Nucleotide Length: 3480 |
| Protein-coding | LOC_Os12g37720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g13440 LOC_Os01g54670 LOC_Os03g58810 LOC_Os03g22880 LOC_Os05g51500 LOC_Os03g25450 LOC_Os03g63730 LOC_Os04g51630 LOC_Os02g18380 LOC_Os07g44190 LOC_Os10g31520 More.. |
| Downstream Genes | LOC_Os12g42370 LOC_Os12g39070 LOC_Os12g38000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g37720.1 |
| Rice Genome Annotation | LOC_Os12g37720.1 |
| Ricechip | LOC_Os12g37720.1 |
| KEGG | osa:4352539 dosa:Os12t0564600-01 |
| Entrez-Gene | 4352539 |