RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g37840.1 View Network Show in Genome Browser |
| Other Names | Os12g0566000 |
| Description | boron transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23248824-23253345 Nucleotide Length: 2136 |
| Protein-coding | LOC_Os12g37840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18550 LOC_Os04g10750 LOC_Os04g10690 LOC_Os03g11440 LOC_Os01g01689 LOC_Os09g17840 LOC_Os09g17830 LOC_Os03g16369 LOC_Os05g33260 LOC_Os06g08480 LOC_Os04g55210 More.. |
| Reference | |
|---|---|
| PubMed | 17675406 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g37840.1 |
| Rice Genome Annotation | LOC_Os12g37840.1 |
| Ricechip | LOC_Os12g37840.1 |
| KEGG | osa:4352546 dosa:Os12t0566000-02 |
| Entrez-Gene | 4352546 |