RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g38100.1 View Network Show in Genome Browser |
| Other Names | Os12g0568700 |
| Description | membrane associated DUF588 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23399038-23399863 Nucleotide Length: 549 |
| Protein-coding | LOC_Os12g38100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g32970 LOC_Os09g07480 LOC_Os07g26110 LOC_Os06g12500 LOC_Os05g27790 LOC_Os05g15630 LOC_Os03g10870 LOC_Os02g12760 LOC_Os01g26120 LOC_Os03g44380 LOC_Os08g38400 More.. |
| Downstream Genes | LOC_Os12g41690 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00680 rn01100 rn01110 rn01120 |
| Metacyc Pathways | P124-PWY ANAEROFRUCAT-PWY ANARESP1-PWY GLUCONEO-PWY PWY-1042 PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g38100.1 |
| Rice Genome Annotation | LOC_Os12g38100.1 |
| Ricechip | LOC_Os12g38100.1 |
| KEGG | osa:4352565 dosa:Os12t0568700-00 |
| Entrez-Gene | 4352565 |