RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g38110.1 View Network Show in Genome Browser |
| Other Names | Os12g0568800 |
| Description | importin subunit beta, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23402616-23408779 Nucleotide Length: 2619 |
| Protein-coding | LOC_Os12g38110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g06350 LOC_Os05g49890 LOC_Os04g26841 LOC_Os12g06890 LOC_Os01g14950 LOC_Os12g06870 LOC_Os07g49260 LOC_Os06g16280 LOC_Os03g42050 LOC_Os11g42420 LOC_Os03g46480 More.. |
| Downstream Genes | LOC_Os12g38210 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR815a osa-miR815b osa-miR815c osa-miR529b |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g38110.1 |
| Rice Genome Annotation | LOC_Os12g38110.1 |
| Ricechip | LOC_Os12g38110.1 |
| KEGG | osa:4352566 dosa:Os12t0568800-01 |
| Entrez-Gene | 4352566 |