RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g38430.1 View Network Show in Genome Browser |
| Other Names | Os12g0572400 |
| Description | SR repressor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23589630-23593485 Nucleotide Length: 792 |
| Protein-coding | LOC_Os12g38430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g38420 LOC_Os06g45910 LOC_Os06g45900 LOC_Os07g36490 LOC_Os08g40880 LOC_Os09g02700 LOC_Os02g49820 LOC_Os06g38980 LOC_Os07g42380 LOC_Os09g10760 LOC_Os07g46820 More.. |
| Downstream Genes | LOC_Os12g43600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g38430.1 |
| Rice Genome Annotation | LOC_Os12g38430.1 |
| Ricechip | LOC_Os12g38430.1 |
| KEGG | osa:4352590 dosa:Os12t0572400-01 |
| Entrez-Gene | 4352590 |